Can only speak from my own experience, which is limited to a couple of Marlins: a 336 (.30-30) and an 1894S (.44 Mag).
Never had a problem that caused a jam on the 336, although short stroking could cause a misfeed. On the 1894, though, because of the shorter case, it's possible to get a misfeed that looks like a "stovepipe" jam in a semi-auto pistol. Never had a problem clearing it, though. Just opened the action fully to extract the rounds.
My lever-gun experience doesn't go much beyond that, but my general understanding is that one really needs to avoid short stroking the lever. Do that, and you should be fine.