When I weighed my own home cast bullets the variations tended to be a result of the divot at the sprue plate cut. Some times a cavity would form there and those bullets would be slightly lighter, otherwise they were very consistent.
Other problems could be incomplete fill out of the mold, varying alloys between batches of bullets and then mixed together for storage, some casters run machines with multiple molds and there could be small variations between molds or even variations between cavities in the same mold.
FWIW if all the bullets are the same length they should seat consistently therefore take up the same amount of space in the case which means pressure will be consistent and the tiny variation will never be noticed.